MetaMorph® Microscopy Automation & Image Analysis Software is the industry standard for automated microscope acquisition, device control, and image analysis, bringing microscopists greater understanding of cell morphology, function, and behavior for over 25 years. It is the ideal "glue" for easily integrating dissimilar fluorescent microscope hardware and peripherals into a single custom workstation, while providing all the tools needed to perform meaningful analysis of acquired images. The software offers many user-friendly application modules for biology-specific analysis such as cell signaling, cell counting, and protein expression.
- Real-time super-resoution image processing supported by GPU hardware acceleration. Resolve sub-cellular objects as small as 20 nm spatially and 40 nm axially.
- Large set of supported hardware device drivers allows researchers to build custom imaging systems to meet their specific application need.
- Multi-dimensional acquisition (MDA) module allows users to easily perform complex acquisition sequences using a simple, guided user interface.
- Integrated morphometric analysis (IMA) measures and categorizes objects into discreet user-definable classes, based on any combination of morphometric parameters, such as shape, size, or optical density.
- Linked images, graphs, and tables allow users to easily view, classify, and correlate images with extracted data.
- Proprietary device and camera streaming accelerates image capture rate and simultaneously transfers images to memory during acquisition, capturing dynamic cellular events in applications such as live cell/kinetic imaging.
- Custom journals to further automate acquisition, processing, and analysis routines, created easily using a drag-and-drop interface on a graphical editor.
- 4D viewer with 3D measurements facilitates visualization of multi-dimensional data sets, stacks, and sequential images, such as multiple Z sections, wavelengths, time points, and positions. Multidimensional image data can be binarized into discrete objects for 3D isosurface viewing and rotation.
- Scan slide module automates acquiring multiple images larger than the field of view and then stitching them together. Ideal for large tissue samples, this ensures reproducibly while taking the guess work out of tiling experiments.
- Live replay captures real time events such as in FRAP, FRET and other laser-based studies, time lapse experiments, live cell imaging, and digital microscopy.
- Image enhancements such as standard kernel and morphometric filters, image arithmetic, and stack visualization, emphasize image characteristics that may not be discernable in the original image, making subsequent analysis and presentation more informative.
Developed in conjunction with researchers, MetaMorph Software offers a range of tools for a variety of specific applications. These MetaMorph Software Applications Modules are tailored to make it easy to perform the common, but sometimes complex, specialized analysis.
Micronuclei Application Module
Micronuclei Application Module classifies cells based on nuclear morphology for genotoxicity applications but is also ideal for cell health or multi-nucleated cell populations with additional markers for analysis of apoptosis, necrosis or to distinguish any small structure next to a large one such as a yeast bud.
- Highly accurate classification of cells (micro-, mono-, bi-, or multi-nucleate) achieved with proprietary algorithm to discriminate phenotypes based on cell morphology, number of nuclei, distance of micronuclei from nucleus, micronuclei vs. "blebs" or "buds".
- Only requires a single fluorophore (nuclear stain) to identify cells in various classifications, eliminating the requirement for a cytoplasm stain, thereby reducing sample preparation, image acquisition and analysis time.
- Use of two additional fluorophores facilitates further phenotypic analysis, such as transfection markers to identify transfected cells or kinetochore markers to differentiate micronuclei originating from clastogens (which create acentric chromosomal fragments) or from aneugens (which cause whole chromosomal losses).
Neurite outgrowth Application Module
Neurite Outgrowth Application Module is designed to measure and characterize outgrowths, the extension of processes from the cell body, which are natural parts of neuronal development. Inhibition or stimulation of neurite outgrowth is implicated in a broad range of neurological disorders or injuries including stroke, Parkinson's disease, Alzheimer's disease, and spinal cord injuries.
- Unique assay that cannot be performed without imaging
- Provides consistent results faster than manual tracing and counting
- Output parameters, on a per field-of-view or per cell basis may include outgrowth count, mean or maximum lengths, branches, straightness, cell number or cell body size, or % with significant growth
Angiogenesis Tube Formation Application Module
Angiogenesis Tube Formation Application Module facilitates the analysis of tube formation, a model experimental system for angiogenesis. The promotion or inhibition of blood vessel formation is one focus for cancer, diabetes and other vascular disease research.
- Captures the three-dimensional behavior of tubes utilizing Z-stack acquisition available through the MetaXpress Software
- A best-focus image of the z-stack is analyzed to characterize tubes by area, length, branch points, and nodes
Mitotic Application Module
Mitotic Index Application Module is designed for the quantitative discrimination of mitotic and interphase cells, a critical tool for oncology drug discovery programs, providing insight into potential anti-cancer therapeutics that rely on arresting mitosis in cancerous cells to prevent uncontrolled proliferation.
Cell Cycle Application Module
Cell Cycle Application Module classifies and quantifies cells in various stages of the cell cycle to investigate cell cycle progression. In healthy non-cancerous cells, challenges with DNA damage, hypoxia, metabolic changes or spindle disruption result in the triggering of checkpoints and cell cycle arrest. Cancerous cells commonly lose checkpoints and divide uncontrollably, even in challenging conditions. With the appropriate tools, researchers can screen for drugs that cause cell cycle arrest or cell death in cancerous cells.
- Differentiates 5 phases of the cell cycle using only a nuclear stain (G0/G1, S, G2, Early or Late M).
- Optional detection of mitosis with specific fluorophores to better distinguish M-phase cells when using low magnification.
- Optional detection of apoptotic markers to detect conditions that trigger apoptosis.
- Interactive color-coded graphs to easily set classification cutoffs.
Monopole Detection Application Module
Monopole Detection Application Module monitors the disruption of the formation of bipolar spindles, a successful mechanism used by drugs such monastol to stop the progression of cancerous cells through mitosis. The module quantifies mitotic cells with monopolar or bipolar spindles in cells stained with a DNA probe and a microtubule probe.
Cell Scoring Application Module
Cell Scoring Application Module is a general and flexible solution to identify subpopulations of cells tagged with a second fluorescent probe and is ideal for examining transfection efficiencies, pathway activation (kinases) or adipogenesis.
- Label all cells with a nuclear or whole cell stain and only cells-of-interest will exhibit staining of the target with a second fluorophore
- Robust identification of cells exhibiting markers for DNA damage, differentiation, or other selective activation
- Equally accurate at low or high magnification
- Output results as number or percent positive or negative or include fluorescence intensity values of each cell or as a total or average of the field-of-view.
Count Nuclei Application Module
Count Nuclei Application Module automates accurate counting of nuclei for most types of cells and are ideal for the study of cell proliferation, cell counting or cell migration. These modules count nuclei even when the background is uneven, providing superior segmentation compared to simple thresholding.
- Module identifies nuclei, taking into consideration nuclear size and varying background intensities
- Touching objects are automatically split
- More consistent between users and faster than manual counting.
- Easier and faster than flow cytometry, which is a low-throughput method that requires trypsinization of cells
Cell Health Application Module
Cell Health Application Module classifies cells states in viable, early apoptosis, late apoptosis or necrosis.
- 3 wavelength detection of nuclear or cytoplasmic staining
- Scores cells as viable, necrotic, early/late apoptotic based on intensity of markers
- Site-by-site data including counts, percentages, total and average area and intensity
- Cell-by-cell data including health status, area and intensity measurements
- Validated with most common cell health dyes such as Yo-Pro 1, Annexin V or CellEvent Caspase 3/7 for apoptosis, Propidium Iodide for necrosis, or mitotoxicity dyes such as JC-1 or JC-10 to study loss of mitochondrial potential
Live/Dead Application Module
Live Dead Application Module is compatible with commercially available Live/Dead assay kits designed to study cell proliferation or death. Common applications monitor cell proliferation associated with cancer or cell death due to neuromuscular diseases such as Alzheimer's and Parkinson's Disease or in response to cytotoxic and apoptotic events.
- 2 wavelength present in any part of the cell, not necessarily the nucleus
- Scores cells as live or dead based on intensity of markers
- Site-by-site data including counts, percentages, total and average area and intensity
- Cell-by-cell data including classification, area and intensity measurements
Granularity Application Module
Granularity Application Module facilitates the analysis of punctate structures such as the one observed during clustering of target molecules for receptor internalization or within the nucleus or even the punctate patterns of mitochondria.
- Windows XP, Windows 7 or Windows 8 required
- MetaMorph Software runs under 32-bit and 64-bit operating systems. Please note, not all hardware drivers are compatible with 64-bit systems. Check here for latest hardware driver status.
Comparison of different MetaMorph Software products can be found here.
- Seamless file sharing and analysis with MetaXpress® High Content Analysis Software
- Analyzes data directly from ImageXpress® Micro and ImageXpress Ultra High Content Screening Systems.
- Compatible products from third party vendors. For complete, detailed listing please see our hardware compatibility link.
- Real-time single-molecule based super-resolution microscopy reconstruction: theoretical and practical insight
- Resolving molecular organization and dynamics using localization-based super-resolution microscopy
- Application Modules and Advanced Analysis in MetaMorph NX Software
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Number of Citations*: 18,700
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* as of August 13, 2015. Source: Google Scholar. Search results include "MetaMorph" and "MDS".